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The aggregation of phytoplankton leads to the settling of particulate organic carbon in the form of marine snow, making it an important process in marine biogeochemical cycles. Diatoms >20 µm in size are considered to contribute appreciably to sinking particle fluxes due to aggregation and the production of transparent exopolymeric particles (TEP), the matrix for marine snow aggregates; however, it is not known whether nano-sized (2–20 µm) diatoms are able to aggregate and produce TEP. Here, we tested the aggregation and production of TEP by the nano-diatom Minutocellus polymorphus and investigated if interactions with bacteria influence aggregation by comparing axenic M. polymorphus cultures with co-cultures of the diatom with bacterial taxa known to colonize marine snow particles. We found that M. polymorphus form sinking aggregates and produce TEP comparably to other phytoplankton groups and that aggregation and TEP production were influenced depending on the species of bacteria added. Aggregation was enhanced in the presence of Marinobacter adhaerens HP15, but not in the presence of Pseudoalteromonas carrageenovora or Vibrio thalassae. Cell aggregation mediated by interactions with specific bacterial species are possible mechanisms behind the export of nano-sized diatoms, such as M. polymorphus, especially in oligotrophic open ocean regions where small phytoplankton dominate.

 

Marine picocyanobacteria are ubiquitous primary producers across the world’s oceans, and play a key role in the global carbon cycle. Recent evidence stemming from in situ investigations have shown that picocyanobacteria are able to sink out of the euphotic zone to depth, which has traditionally been associated with larger, mineral ballasted cells. The mechanisms behind the sinking of picocyanobacteria remain a point of contention, given that they are too small to sink on their own. To gain a mechanistic understanding of the potential role of picocyanobacteria in carbon export, we tested their ability to form “suspended” (5–60 μm) and “visible” (ca. > 0.1 mm) aggregates, as well as their production of transparent exopolymer particles (TEP)—which are a key component in the formation of marine aggregates. Additionally, we investigated if interactions with heterotrophic bacteria play a role in TEP production and aggregation in Prochlorococcus and Synechococcus by comparing xenic and axenic cultures. We observed TEP production and aggregation in batch cultures of axenic Synechococcus, but not in axenic Prochlorococcus. Heterotrophic bacteria enhanced TEP production as well as suspended and visible aggregate formation in Prochlorococcus, while in Synechococcus, aggregation was enhanced with no changes in TEP. Aggregation experiments using a natural plankton community dominated by picocyanobacteria resulted in aggregation only in the presence of the ballasting mineral kaolinite, and only when Synechococcus were in their highest seasonal abundance. Our results point to a different export potential between the two picocyanobacteria, which may be mediated by interactions with heterotrophic bacteria and presence of ballasting minerals. Further studies are needed to clarify the mechanistic role of bacteria in TEP production and aggregation of these picocyanobacteria. 

Plankton‐derived, microscopic, and macroscopic sinking aggregates constitute most of the particulate organic carbon (POC) flux in the oceans. While the flux of particulate organic matter and associated elements has been quantified at the Bermuda Atlantic Time‐series Study (BATS) station for several decades, we lack an understanding of the source and composition of sinking particles, as well as the fate of predominant phytoplankton taxa. We determined the composition of individual sinking particles and their microbial communities in the upper 300 m depth at the BATS station in fall 2017 and spring 2018 by image analysis and V4 amplicon sequencing of the 16S and 18S rRNA genes. The sinking particles were primarily composed of phytodetrital aggregates, fecal aggregates, and fecal pellets. In the fall, phytodetrital aggregates were numerically dominant and drove the majority of the POC flux; however, in the spring, particle flux of all particle categories declined below 150 m, and the POC flux at 200 m shifted to one driven by fecal aggregates. The relative composition of the microbial communities associated with phytodetrital and fecal aggregates were statistically indistinguishable in both seasons, and prokaryotic taxa known to be associated with the gut microbiomes of zooplankton were indicators of the sinking particles. Our results point to the utilization and modification of sinking particles by resident midwater zooplankton populations, and to fecal pellets as the predominant mechanism transporting picophytoplankton to depth.